Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs25655
rs25655
CAPN2
0.925 0.080 1 223712706 missense variant C/G snv 1.00 0.99
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2019 2019
dbSNP: rs1801726
rs1801726
CASR
0.732 0.280 3 122284985 missense variant G/C snv 0.95 0.92
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2010 2010
dbSNP: rs9915936
rs9915936
AXIN2
0.827 0.120 17 65537671 synonymous variant T/C snv 0.90 0.90
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 < 0.001 1 2011 2011
dbSNP: rs2740348
rs2740348
GEMIN4
0.851 0.160 17 746695 missense variant G/C;T snv 0.85
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2012 2012
dbSNP: rs2057482
rs2057482
HIF1A ; HIF1A-AS2 ; HIF1A-AS3
0.701 0.440 14 61747130 3 prime UTR variant T/C snv 0.84 0.80
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2012 2012
dbSNP: rs35605
rs35605
ABCC1
0.925 0.080 16 16068162 synonymous variant T/C snv 0.79 0.84
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2018 2018
dbSNP: rs4245739
rs4245739
MDM4
0.708 0.360 1 204549714 3 prime UTR variant C/A;G snv 0.77; 6.2E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 2 2013 2015
dbSNP: rs1047303
rs1047303
HSD3B1
0.851 0.120 1 119514623 missense variant C/A snv 0.75
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.020 1.000 2 2002 2007
dbSNP: rs1058205
rs1058205
KLK3
0.925 0.080 19 50860142 3 prime UTR variant C/T snv 0.75 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 2 2008 2018
dbSNP: rs1799983
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.090 0.778 9 2006 2014
dbSNP: rs3208008
rs3208008
TNFRSF6B ; RTEL1 ; RTEL1-TNFRSF6B
0.925 0.080 20 63694757 missense variant A/C snv 0.75 0.81
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2019 2019
dbSNP: rs2229113
rs2229113
IL10RA
0.763 0.360 11 117998955 missense variant A/G snv 0.74 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2017 2017
dbSNP: rs9666607
rs9666607
CD44
0.925 0.080 11 35204608 missense variant A/G;T snv 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2018 2018
dbSNP: rs1982151
rs1982151
RMI1
0.807 0.120 9 84002350 missense variant A/G;T snv 0.73
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2009 2009
dbSNP: rs11781886
rs11781886
NKX3-1 ; LOC107986930
0.925 0.080 8 23682904 5 prime UTR variant C/T snv 0.72 0.72
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.020 1.000 2 2010 2014
dbSNP: rs2274911
rs2274911
GPRC6A
0.851 0.160 6 116809541 missense variant G/A snv 0.72 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.020 1.000 2 2013 2016
dbSNP: rs2660
rs2660
OAS1
0.851 0.160 12 112919637 missense variant G/A snv 0.71 0.75
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2011 2011
dbSNP: rs2910164
rs2910164
MIR146A ; MIR3142HG
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.050 0.600 5 2010 2018
dbSNP: rs2287939
rs2287939
AMACR ; C1QTNF3-AMACR
0.851 0.160 5 33998778 missense variant A/C;G snv 1.6E-05; 0.70
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.020 1.000 2 2011 2015
dbSNP: rs2305745
rs2305745
HPN ; HPN-AS1
0.925 0.080 19 35065377 intron variant G/A snv 0.70 0.63
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2012 2012
dbSNP: rs2278008
rs2278008
AMACR ; C1QTNF3-AMACR
0.851 0.160 5 33989413 missense variant C/T snv 0.70 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.030 0.333 3 2007 2015
dbSNP: rs2292912
rs2292912
CRY2
0.851 0.120 11 45856137 non coding transcript exon variant C/A;G;T snv 8.0E-06; 0.69
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.010 1.000 1 2009 2009
dbSNP: rs25487
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.100 0.900 10 2004 2018
dbSNP: rs1042522
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.060 0.667 6 2007 2016
dbSNP: rs523349
rs523349
SRD5A2
0.689 0.440 2 31580636 missense variant G/A;C;T snv 0.66; 4.9E-06
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.100 0.690 29 1999 2015